A curated list of awesome Machine Learning frameworks, libraries and software.

🌠 Dark powered asynchronous completion framework for neovim/Vim8

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

This is the development home of the workflow management system Snakemake. For general information, see

Python library to handle Gene Ontology (GO) terms

Cutadapt removes adapter sequences from sequencing reads

Data and analysis for NA12878 genome on nanopore

Tombo is a suite of tools primarily for the identification of modified nucleotides from raw nanopore sequencing data.

A tool to build a website to browse hundreds or thousands of GWAS.

A SingleCell RNASeq pre-processing snakemake workflow

Pipeline for differential gene expression (DGE) and differential transcript usage (DTU) analysis using long reads

GO enrichment with python -- pandas meets networkx

IDR