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Use more recent version of nft-utils

enhancementImprovement for existing functionalityImprovement for existing functionality

Status: Open.

#118 In nf-core/createtaxdb;

· jfy133 opened on Oct 23, 2025

Occasioanl 'java.util.ConcurrentModificationException' errors

bugSomething isn't workingSomething isn't working

Status: Open.

#114 In nf-core/createtaxdb;

· jfy133 opened on Oct 2, 2025

Kraken2 build fails with local taxonomy files, works with URLs

bugSomething isn't workingSomething isn't working

Status: Open.

#113 In nf-core/createtaxdb;

· ellmagu opened on Sep 25, 2025

MALT should support parallel AA and DNA database building

bugSomething isn't workingSomething isn't working

Status: Open.

#112 In nf-core/createtaxdb;

· jfy133 opened on Sep 18, 2025

DIAMOND version does not support latest NCBI taxonomy name changes (e.g. superkingdom -> domain)

bugSomething isn't workingSomething isn't working

Status: Open.

#97 In nf-core/createtaxdb;

· jfy133 opened on Jun 5, 2025

Consider adding a low-complexity sequence masking to genomes before building

enhancementImprovement for existing functionalityImprovement for existing functionality

Status: Open.

#96 In nf-core/createtaxdb;

· jfy133 opened on Jun 5, 2025

Consider using nf-boost to clean up intermediate files from GUNZIP/CAT processes?

enhancementImprovement for existing functionalityImprovement for existing functionality

Status: Open.

#43 In nf-core/createtaxdb;

· jfy133 opened on Oct 7, 2024

· 

1.2.0: Charming Chaac

Add support for metacache db

enhancementImprovement for existing functionalityImprovement for existing functionality

Status: Open.

#39 In nf-core/createtaxdb;

· ChillarAnand opened on Jul 5, 2024

· 

1.2.0: Charming Chaac

Consider input genome quality before building

enhancementImprovement for existing functionalityImprovement for existing functionality

Status: Open.

#27 In nf-core/createtaxdb;

· jfy133 opened on Feb 27, 2024

· 

1.2.0: Charming Chaac

Consider database reduction options

enhancementImprovement for existing functionalityImprovement for existing functionality

Status: Open.

#16 In nf-core/createtaxdb;

· jfy133 opened on Dec 14, 2023

· 

1.2.0: Charming Chaac