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Fix conda #90

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Merged
d4straub merged 3 commits into from
Nov 12, 2025
Merged

Fix conda #90

d4straub merged 3 commits into from
Nov 12, 2025

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@d4straub d4straub commented Nov 12, 2025 •
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Fixes failing conda tests in #88
This PR was intentionally initially against master to test conda.

PR checklist

  • This comment contains a description of changes (with reason).
  • If you've fixed a bug or added code that should be tested, add tests!
  • If you've added a new tool - have you followed the pipeline conventions in the contribution docs
  • If necessary, also make a PR on the nf-core/detaxizer branch on the nf-core/test-datasets repository.
  • Make sure your code lints (nf-core pipelines lint).
  • Ensure the test suite passes (nextflow run . -profile test,docker --outdir <OUTDIR>).
  • Check for unexpected warnings in debug mode (nextflow run . -profile debug,test,docker --outdir <OUTDIR>).
  • Usage Documentation in docs/usage.md is updated.
  • Output Documentation in docs/output.md is updated.
  • CHANGELOG.md is updated.
  • README.md is updated (including new tool citations and authors/contributors).

@d4straub d4straub changed the base branch from master to dev November 12, 2025 16:33
@d4straub d4straub changed the title Fix conda 2 Fix conda Nov 12, 2025
@d4straub d4straub marked this pull request as ready for review November 12, 2025 16:36
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d4straub commented Nov 12, 2025

thanks!

@d4straub d4straub merged commit 89fb0c3 into nf-core:dev Nov 12, 2025
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@d4straub d4straub deleted the fix-conda-2 branch November 12, 2025 19:59
@d4straub d4straub mentioned this pull request Jan 8, 2026
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@mashehu mashehu mashehu approved these changes

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