Remove expected .txt suffix for snp coverage
#854
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Markdown linting is failingTo keep the code consistent with lots of contributors, we run automated code consistency checks.
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jfy133
approved these changes
Mar 18, 2022
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@TCLamnidis can wait for CI tests to pass then you can merge :) |
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The most recent version of pileupcaller removes the
.txtsuffix that previous versions added to the genotype files.eigenstrat_snp_coverage.pycould not find the input files because it expected these suffixes to be present. With these changes, the script will no longer expect a.txtsuffix to its input files.PR checklist
nf-core lint .).nextflow run . -profile test,docker).CHANGELOG.mdis updated.