nf-core · jfy133 · Mar 25, 2022 · Mar 24, 2022 · Mar 24, 2022
diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml
@@ -37,13 +37,13 @@ jobs:
 
       - name: Build new docker image
         if: env.MATCHED_FILES
-        run: docker build --no-cache . -t nfcore/eager:2.4.3
+        run: docker build --no-cache . -t nfcore/eager:dev
 
       - name: Pull docker image
         if: ${{ !env.MATCHED_FILES }}
         run: |
           docker pull nfcore/eager:dev
-          docker tag nfcore/eager:dev nfcore/eager:2.4.3
+          docker tag nfcore/eager:dev nfcore/eager:dev
 
       - name: Install Nextflow
         env:

diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -3,6 +3,16 @@
 The format is based on [Keep a Changelog](http://keepachangelog.com/en/1.0.0/)
 and this project adheres to [Semantic Versioning](http://semver.org/spec/v2.0.0.html).
 
+## [dev]
+
+### `Added`
+
+### `Fixed`
+
+### `Dependencies`
+
+### `Deprecated`
+
 ## [2.4.3] - 2022-03-24
 
 ### `Added`
@@ -15,7 +25,7 @@ and this project adheres to [Semantic Versioning](http://semver.org/spec/v2.0.0.
 - [#843](https://github.com/nf-core/eager/issues/843) Re-add direct piping of AdapterRemovalFixPrefix to pigz
 - [#844](https://github.com/nf-core/eager/issues/844) Fixed reference masking prior to pmdtools
 - [#845](https://github.com/nf-core/eager/issues/845) Updates parameter documention to specify `-s` preseq parameter also applies to lc_extrap
-- [#851](https://github.com/nf-core/eager/issues/851) Fixes a file-name clash during additional_library_merge, post-BAM trimming of different UDG treated libraries of a sample
+- [#851](https://github.com/nf-core/eager/issues/851) Fixes a file-name clash during additional_library_merge, post-BAM trimming of different UDG treated libraries of a sample (❤ to @alexandregilardet for reporting)
 - Renamed a range of MultiQC general stats table headers to improve clarity, documentation has been updated accordingly
 - [#857](https://github.com/nf-core/eager/issues/857) Corrected samtools fastq flag to _retain_ read-pair information when converting off-target BAM files to fastq in paired-end mapping (❤ to @alexhbnr for reporting)
 - [#866](https://github.com/nf-core/eager/issues/866) Fixed a typo in the indexing step of BWA mem when not-collapsing (❤ to @alexhbnr for reporting)

diff --git a/Dockerfile b/Dockerfile
@@ -7,7 +7,7 @@ COPY environment.yml /
 RUN conda env create --quiet -f /environment.yml && conda clean -a
 
 # Add conda installation dir to PATH (instead of doing 'conda activate')
-ENV PATH /opt/conda/envs/nf-core-eager-2.4.3/bin:$PATH
+ENV PATH /opt/conda/envs/nf-core-eager-2.4.4dev/bin:$PATH
 
 # Dump the details of the installed packages to a file for posterity
-RUN conda env export --name nf-core-eager-2.4.3 > nf-core-eager-2.4.3.yml
+RUN conda env export --name nf-core-eager-2.4.4dev > nf-core-eager-2.4.4dev.yml
diff --git a/environment.yml b/environment.yml
@@ -1,6 +1,6 @@
 # You can use this file to create a conda environment for this pipeline:
 #   conda env create -f environment.yml
-name: nf-core-eager-2.4.3
+name: nf-core-eager-2.4.4dev
 channels:
   - conda-forge
   - bioconda

diff --git a/nextflow.config b/nextflow.config
@@ -284,7 +284,7 @@ params {
 
 // Container slug. Stable releases should specify release tag!
 // Developmental code should specify :dev
-process.container = 'nfcore/eager:2.4.3'
+process.container = 'nfcore/eager:dev'
 
 // Load base.config by default for all pipelines
 includeConfig 'conf/base.config'
@@ -414,7 +414,7 @@ manifest {
   description = 'A fully reproducible and state-of-the-art ancient DNA analysis pipeline'
   mainScript = 'main.nf'
   nextflowVersion = '>=20.07.1'
-  version = '2.4.3'
+  version = '2.4.4dev'
 }
 
 // Function to ensure that resource requirements don't go beyond
@@ -448,4 +448,4 @@ def check_max(obj, type) {
       return obj
     }
   }
-}
+}