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Merged
Felix-Kummer merged 5 commits into from
Jan 19, 2025
Merged

Post-review PR for v1.0.0 #17

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0eb2f03
Bump version after release
Felix-Kummer Jan 17, 2025
1a9c45c
Update changelog
Felix-Kummer Jan 17, 2025
25cf117
Updated Zenodo information
Felix-Kummer Jan 17, 2025
d54caf3
fixed linter error
Felix-Kummer Jan 17, 2025
7b7a83e
Added missing doi entry
Felix-Kummer Jan 19, 2025
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2 changes: 1 addition & 1 deletion .nf-core.yml
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Expand Up @@ -16,4 +16,4 @@ template:
skip_features:
- igenomes
- fastqc
version: 1.0.0
version: 1.1.0dev
10 changes: 10 additions & 0 deletions CHANGELOG.md
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Expand Up @@ -15,3 +15,13 @@ This work is a continuation, and nf-core port, of the [original version of this
### `Dependencies`

### `Deprecated`

## v1.1.0dev - [date]

### `Added`

### `Fixed`

### `Dependencies`

### `Deprecated`
5 changes: 2 additions & 3 deletions README.md
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Expand Up @@ -4,7 +4,7 @@
<img alt="nf-core/rangeland" src="docs/images/nf-core-rangeland_logo_light.png">
</picture>
</h1>[![GitHub Actions CI Status](https://github.com/nf-core/rangeland/actions/workflows/ci.yml/badge.svg)](https://github.com/nf-core/rangeland/actions/workflows/ci.yml)
[![GitHub Actions Linting Status](https://github.com/nf-core/rangeland/actions/workflows/linting.yml/badge.svg)](https://github.com/nf-core/rangeland/actions/workflows/linting.yml)[![AWS CI](https://img.shields.io/badge/CI%20tests-full%20size-FF9900?labelColor=000000&logo=Amazon%20AWS)](https://nf-co.re/rangeland/results)[![Cite with Zenodo](http://img.shields.io/badge/DOI-10.5281/zenodo.XXXXXXX-1073c8?labelColor=000000)](https://doi.org/10.5281/zenodo.XXXXXXX)
[![GitHub Actions Linting Status](https://github.com/nf-core/rangeland/actions/workflows/linting.yml/badge.svg)](https://github.com/nf-core/rangeland/actions/workflows/linting.yml)[![AWS CI](https://img.shields.io/badge/CI%20tests-full%20size-FF9900?labelColor=000000&logo=Amazon%20AWS)](https://nf-co.re/rangeland/results)[![Cite with Zenodo](http://img.shields.io/badge/DOI-10.5281/zenodo.14679189-1073c8?labelColor=000000)](https://doi.org/10.5281/zenodo.14679189)
[![nf-test](https://img.shields.io/badge/unit_tests-nf--test-337ab7.svg)](https://www.nf-test.com)

[![Nextflow](https://img.shields.io/badge/nextflow%20DSL2-%E2%89%A524.04.2-23aa62.svg)](https://www.nextflow.io/)
Expand Down Expand Up @@ -105,8 +105,7 @@ For further information or help, don't hesitate to get in touch on the [Slack `#

## Citations

<!-- TODO nf-core: Add citation for pipeline after first release. Uncomment lines below and update Zenodo doi and badge at the top of this file. -->
<!-- If you use nf-core/rangeland for your analysis, please cite it using the following doi: [10.5281/zenodo.XXXXXX](https://doi.org/10.5281/zenodo.XXXXXX) -->
If you use nf-core/rangeland for your analysis, please cite it using the following doi: [10.5281/zenodo.14679189](https://doi.org/10.5281/zenodo.14679189)

An extensive list of references for the tools used by the pipeline can be found in the [`CITATIONS.md`](CITATIONS.md) file.

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7 changes: 4 additions & 3 deletions assets/multiqc_config.yml
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@@ -1,7 +1,8 @@
report_comment: >
This report has been generated by the <a href="https://github.com/nf-core/rangeland/releases/tag/1.0.0" target="_blank">nf-core/rangeland</a>
analysis pipeline. For information about how to interpret these results, please see the
<a href="https://nf-co.re/rangeland/1.0.0/docs/output" target="_blank">documentation</a>.
This report has been generated by the <a href="https://github.com/nf-core/rangeland/tree/dev"
target="_blank">nf-core/rangeland</a> analysis pipeline. For information about how
to interpret these results, please see the <a href="https://nf-co.re/rangeland/dev/docs/output"
target="_blank">documentation</a>.
report_section_order:
"nf-core-rangeland-methods-description":
order: -1000
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4 changes: 2 additions & 2 deletions nextflow.config
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Expand Up @@ -277,8 +277,8 @@ manifest {
mainScript = 'main.nf'
defaultBranch = 'master'
nextflowVersion = '!>=24.04.2'
version = '1.0.0'
doi = ''
version = '1.1.0dev'
doi = 'https://doi.org/10.5281/zenodo.14679189'
}

// Nextflow plugins
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