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Fix issues in dev #709

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Merged
merged 1 commit into from
Jun 17, 2025
Merged

Fix issues in dev #709

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1 change: 1 addition & 0 deletions .github/workflows/nf-test.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -37,6 +37,7 @@ jobs:
runs-on: # use self-hosted runners
- runs-on=$-nf-test-changes
- runner=4cpu-linux-x64
- disk=large
outputs:
shard: ${{ steps.set-shards.outputs.shard }}
total_shards: ${{ steps.set-shards.outputs.total_shards }}
Expand Down
13 changes: 11 additions & 2 deletions tests/default.nf.test.snap
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Original file line number Diff line number Diff line change
Expand Up @@ -341,6 +341,15 @@
"TABIX_TABIX": {
"tabix": 1.2
},
"TABIX_TABIX_MERGE": {
"tabix": 1.2
},
"TABIX_TABIX_MT2": {
"tabix": 1.2
},
"TABIX_TABIX_MT": {
"tabix": 1.2
},
"TABIX_VEP": {
"tabix": 1.2
},
Expand All @@ -366,7 +375,7 @@
"vcfanno": "0.3.5"
},
"Workflow": {
"nf-core/raredisease": "v2.6.0dev"
"nf-core/raredisease": "v2.6.0"
},
"ZIP_TABIX_ROHCALL": {
"tabix": 1.2
Expand Down Expand Up @@ -569,6 +578,6 @@
"nf-test": "0.9.2",
"nextflow": "25.04.3"
},
"timestamp": "2025-06-11T20:29:48.369992294"
"timestamp": "2025-06-16T15:08:20.089341908"
}
}
13 changes: 11 additions & 2 deletions tests/test_bam.nf.test.snap
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Original file line number Diff line number Diff line change
Expand Up @@ -322,6 +322,15 @@
"TABIX_TABIX": {
"tabix": 1.2
},
"TABIX_TABIX_MERGE": {
"tabix": 1.2
},
"TABIX_TABIX_MT2": {
"tabix": 1.2
},
"TABIX_TABIX_MT": {
"tabix": 1.2
},
"TABIX_VEP": {
"tabix": 1.2
},
Expand All @@ -347,7 +356,7 @@
"vcfanno": "0.3.5"
},
"Workflow": {
"nf-core/raredisease": "v2.6.0dev"
"nf-core/raredisease": "v2.6.0"
},
"ZIP_TABIX_ROHCALL": {
"tabix": 1.2
Expand Down Expand Up @@ -534,6 +543,6 @@
"nf-test": "0.9.2",
"nextflow": "25.04.3"
},
"timestamp": "2025-06-11T16:17:56.744454194"
"timestamp": "2025-06-16T15:11:10.063786271"
}
}
13 changes: 11 additions & 2 deletions tests/test_singleton.nf.test.snap
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Original file line number Diff line number Diff line change
Expand Up @@ -329,6 +329,15 @@
"TABIX_TABIX": {
"tabix": 1.2
},
"TABIX_TABIX_MERGE": {
"tabix": 1.2
},
"TABIX_TABIX_MT2": {
"tabix": 1.2
},
"TABIX_TABIX_MT": {
"tabix": 1.2
},
"TABIX_VEP": {
"tabix": 1.2
},
Expand All @@ -348,7 +357,7 @@
"vcfanno": "0.3.5"
},
"Workflow": {
"nf-core/raredisease": "v2.6.0dev"
"nf-core/raredisease": "v2.6.0"
},
"ZIP_TABIX_ROHCALL": {
"tabix": 1.2
Expand Down Expand Up @@ -457,6 +466,6 @@
"nf-test": "0.9.2",
"nextflow": "25.04.3"
},
"timestamp": "2025-06-11T20:44:39.735905645"
"timestamp": "2025-06-16T15:14:25.756733004"
}
}
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