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test_snap_versions lint failure due to snapshot key ordering mismatch (and stale snapshot persistence)

bugSomething isn't workingSomething isn't working

Status: Open.

#3969 In nf-core/tools;

· an-altosian opened on Dec 11, 2025

nf-core modules install command hanging

awaiting-feedback

bugSomething isn't workingSomething isn't working

Status: Open.

#3960 In nf-core/tools;

· dcrp1234 opened on Dec 8, 2025

Pipeline container config builder

Status: Open.

#3953 In nf-core/tools;

· mashehu opened on Dec 2, 2025

implement wave.yml as tools command

Status: Open.

#3952 In nf-core/tools;

· mashehu opened on Dec 2, 2025

Bad check on pipelines <code>modules.json</code>

Status: Open.

#3951 In nf-core/tools;

· AlexVCaron opened on Dec 1, 2025

Allow less strict job name for nf-test in ci workflows

enhancement

Status: Open.

#3950 In nf-core/tools;

· SusiJo opened on Dec 1, 2025

Linter drops trailing double quote when parsing eval() in topics

Status: Open.

#3941 In nf-core/tools;

· pinin4fjords opened on Nov 29, 2025

included_configs: false is only recognised as a test name in --release mode

bugSomething isn't workingSomething isn't working

Status: Open.

#3940 In nf-core/tools;

· prototaxites opened on Nov 27, 2025

Wrong argument type in log.debug

bugSomething isn't workingSomething isn't working

Status: Open.

#3938 In nf-core/tools;

· OlivierCoen opened on Nov 27, 2025

Remove testing of <code>latest-everything</code> from every single PR CI run

Status: Open.

#3932 In nf-core/tools;

· jfy133 opened on Nov 26, 2025

<code>files_unchanged</code> lint check is broken for certain custom pipelines

bugSomething isn't workingSomething isn't working

Status: Open.

#3927 In nf-core/tools;

· awgymer opened on Nov 25, 2025

nf-core modules lint --fix produces mangled output

bugSomething isn't workingSomething isn't working

Status: Open.

#3901 In nf-core/tools;

· TCLamnidis opened on Nov 14, 2025