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0.2.3

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Adding support for arbitrary long query and targets (#13)

* Fix remaining compiler warnings

* Support very long reads

0.2.2

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update glocal alignment to use parasail v2.6 (#11)

* update glocal alignment to use parasail v2.6

This also fixes a bug reporting the target start in glocal alignment

* increase the maximum query/target length from 1024 to 65536

0.2.1

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Fix the usage for option -O (was listed as -o)

0.2.0

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Bug fix: Makefile should require parasail build before ksw

0.1.0

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Replacing extension, glocal, and global alignment with ksw2 implement…

…ations (#2)

See: https://github.com/lh3/ksw2

Also added a few more tests.

0.0.2

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Allow the version to be passed in during the make command.

0.0.1

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Initial move to ksw only