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sprocket Public
Forked from stjude-rust-labs/sprocketA bioinformatics workflow engine built on top of the Workflow Description Language (WDL).
Rust Apache License 2.0 UpdatedOct 22, 2025 -
ax-botorch-example Public
Example repository for how to use the Ax platform and botorch for a few use cases.
Python UpdatedSep 23, 2025 -
r_DunderMifflinBot Public
Simple bot written in python that pulls hot posts from r/DunderMifflin and posts them to a designated twitter account
Python GNU General Public License v3.0 UpdatedSep 10, 2025 -
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scan-atac-sim Public
Forked from gersteinlab/scan-atac-simSCAN-ATAC Sim is a single-cell ATAC-seq data simulator used to benchmark various single-cell ATAC-seq data analysis methods.
C++ UpdatedAug 12, 2025 -
dsars Public
Data structures and algorithms in rust. For learning purposes
Rust UpdatedJul 22, 2025 -
biocfilecachers Public
Forked from khoroshevskyi/biocfilecachersImplementation of BiocFileCache in Rust
Rust MIT License UpdatedJul 21, 2025 -
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optipyzer Public
Multi-Species Codon Optimization Engine
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kickstart.nvim Public
Forked from nvim-lua/kickstart.nvimA launch point for your personal nvim configuration
Lua MIT License UpdatedFeb 21, 2025 -
vram-calculator Public
Forked from furiousteabag/vram-calculatorTransformer GPU VRAM estimator
TypeScript MIT License UpdatedFeb 19, 2025 -
optipyzer-rs Public
Rust implementation of my multi-species codon optimization algorithm. This is a work in progress.
Rust UpdatedJan 22, 2025 -
uniwig-test Public
Small, (hopefully) reproducible example of issues with uniwig for Donald
Shell UpdatedDec 12, 2024 -
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textractor Public
A simple text extractor for various files. Includes core functionality for extracting text from files, a command-line interface, restful API, and python bindings.
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sniffers Public
A basic file sniffer to detect file changes, written in Rust
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rust-gc-count Public
Forked from andrewyatz/rust-gc-countA tool for generating wiggle files of GC from DNA written in Rust.
Rust Apache License 2.0 UpdatedFeb 21, 2024 -
SnapATAC2 Public
Forked from scverse/SnapATAC2Single-cell epigenomics analysis tools
Python UpdatedJan 25, 2024 -
genimtools-web Public
Web interface for genimtools with wasm-targeted rust binidngs
Rust UpdatedJan 9, 2024 -
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rust-bio Public
Forked from rust-bio/rust-bioThis library provides implementations of many algorithms and data structures that are useful for bioinformatics. All provided implementations are rigorously tested via continuous integration.
Rust MIT License UpdatedJul 4, 2023
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