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Biomedical and Data Lab at Mahidol University

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29 repositories

scicap-titipapa
Public
Leveraging Author-Specific Context for Scientific Figure Caption Generation: 3rd SciCap Challenge
Python
•
Apache License 2.0
•1•4•0•0•Updated Oct 10, 2025Oct 10, 2025
muocr
Public
Evaluation script for Optical Character Recognition
Python
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Apache License 2.0
•0•0•0•0•Updated Oct 1, 2025Oct 1, 2025
ec-raft
Public
[ACL 2025 findings] EC-RAFT: Automated Generation of Clinical Trial Eligibility Criteria through Retrieval-Augmented Fine-Tuning
Python
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Apache License 2.0
•1•4•0•0•Updated Sep 1, 2025Sep 1, 2025
hands-on-labs
Public
Hands-on Machine Learning Lab for BME students
Jupyter Notebook
•3•0•2•0•Updated Aug 29, 2025Aug 29, 2025
autoaudiogram
Public
Object detection-based audiogram classification
Jupyter Notebook
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MIT License
•0•6•0•0•Updated Aug 18, 2025Aug 18, 2025
archehr-qa-lamar
Public
LAMAR at ArchEHR-QA, BioNLP workshop ACL 2025 (1st-place human evaluation score)
Python
•0•2•0•0•Updated Jul 31, 2025Jul 31, 2025
biodatlab.github.io
Public
Website for Biomedical and Data (Bio-Dat) lab at Mahidol University, Thailand
website data-science machine-learning gatsby biomedical gatsbyjs lab-website biomedical-engineering
JavaScript
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MIT License
•16•19•0•0•Updated Jul 30, 2025Jul 30, 2025
thonburian-whisper
Public
Thonburian Whisper: Open models for fine-tuned Whisper in Thai. Try our demo on Huggingface space:
transformers automatic-speech-recognition thai whisper huggingface-transformers
Jupyter Notebook
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MIT License
•18•165•2•1•Updated Jul 29, 2025Jul 29, 2025
deep-learning-skooldio
Public
Deep learning notebooks for Skooldio
Jupyter Notebook
•8•20•0•0•Updated Jun 27, 2025Jun 27, 2025
egbi101
Public
Basic Engineering Skills in Biomedical Engineering
Jupyter Notebook
•39•3•0•28•Updated Apr 6, 2025Apr 6, 2025
gradio-meeting-summariser
Public
Gradio app using Gemini to transcribe and summarize audios into Thai governmental format
summarization thai-language gradio llm-inference gradio-python-llm
Python
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MIT License
•1•5•0•1•Updated Feb 7, 2025Feb 7, 2025
ocr-skooldio
Public
Jupyter Notebook
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MIT License
•3•0•3•0•Updated Nov 2, 2024Nov 2, 2024
cpf-genai-workshop
Public
Workshop on Generative AI for CPF
Jupyter Notebook
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Apache License 2.0
•0•1•1•0•Updated Oct 4, 2024Oct 4, 2024
learnai-potholes-detection
Public
This is a crowdsource dataset and training script from LearnAI "Hands-on Deep Learning with Pytorch" on August 26, 2023
Jupyter Notebook
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MIT License
•0•8•0•0•Updated Sep 4, 2024Sep 4, 2024
CraNeXt
Public
A deep learning model for skull reconstruction
Jupyter Notebook
•4•0•0•0•Updated Aug 26, 2024Aug 26, 2024
autoimplantpipe
Public
A repository for end-to-end autoimplant pipeline: automatic skull segmentation and autoimplant
pipeline transfer-learning unet unet-image-segmentation autoimplant autoimplant-pipeline
Python
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Apache License 2.0
•1•4•0•0•Updated Jul 4, 2024Jul 4, 2024
multitask-vision-ecg
Public
MS and LVEF classification for ECG image using multi-task deep learning. Demo website (not included model inference, in Thai) ↓
deep-learning web-application ecg-signal left-ventricle-quantification multitask-classification ecg-classification myocardial-infarction
Jupyter Notebook
•4•4•2•0•Updated Apr 20, 2024Apr 20, 2024
siriraj-assist
Public
Simple chatbot for Siriraj SIP. This is the demo repository for Mahidol's hackathon
Jupyter Notebook
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Apache License 2.0
•3•12•1•0•Updated Mar 19, 2024Mar 19, 2024
egbe601
Public
Medical Signal Processing and instrumentation
Jupyter Notebook
•0•1•0•0•Updated Jan 9, 2024Jan 9, 2024
community-notebooks
Public
Community notebooks for the Biomedical and Data lab, Mahidol
Jupyter Notebook
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MIT License
•9•7•0•0•Updated Jan 3, 2024Jan 3, 2024
bacteria-detection
Public
Deep Learning-Based Object Detection and Bacteria Morphological Feature Extraction for Antimicrobial Resistance Applications
drugs object-detection bacteria microscopic-images bacteria-detection
Python
•7•13•0•0•Updated Nov 23, 2023Nov 23, 2023
nbdt-llm
Public
Repository for exploring recommendation using language model for NBDT journal
Jupyter Notebook
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MIT License
•2•0•0•0•Updated Oct 9, 2023Oct 9, 2023
xlab-recommendation
Public
Collection of notebooks for X-Lab Recommendation Class
Jupyter Notebook
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MIT License
•2•1•0•0•Updated Oct 4, 2023Oct 4, 2023
liver-lesions-detection-2023
Public
1st place solution for the Liver Lesions Detection based on Ultrasound Image Hackathon (12-14 Aug, 2023)
Python
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MIT License
•1•10•0•0•Updated Aug 20, 2023Aug 20, 2023
score-claim-extraction
Public
Code for SCORE claim extraction
nlp classification claims scientific-claim
Jupyter Notebook
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MIT License
•0•1•0•0•Updated Jun 5, 2023Jun 5, 2023
icip-challenge-2022
Public
Multitask learning via pseudo-label generation and ensemble prediction for parasitic egg cell detection: IEEE ICIP Challenge 2022 (3rd place solution)
challenge image-processing classification object-detection ensemble-model icip detection-model parasitic-egg icip2022 ieee-icip
Python
•1•6•0•0•Updated May 6, 2023May 6, 2023
.github
Public
Mahidol University BAD Lab
0•0•0•0•Updated Jan 14, 2023Jan 14, 2023
deep-learning-image-analysis-learnai
Public
Notebooks for "Deep learning for image analysis" course by Learn AI
Jupyter Notebook
•1•1•0•0•Updated Nov 7, 2022Nov 7, 2022
egbe609
Public
Fundamental of Biomedical Engineering Master Program in Biomedical Engineering
Jupyter Notebook
•0•6•1•0•Updated Dec 5, 2021Dec 5, 2021