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Source code and data for models to predict gut permanence

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gutmetabos

Source code and data for Super Learner model to predict gut permanence

Better use a conda environment like this:

conda create -n gutper -c conda-forge rdkit jupyter pandas numpy spyder scikit-learn scipy seaborn

To get predictions: edit with your compounds and use runSL.py

It uses an already trained model saved in SLgutper.sav

To re-train the model: use SLtrainer.py

gutper_set2.csv contains the training dataset

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