fastqc and multiqc added

freebayes uses options recommended for non-diploid genome variant cal…

…ling

Updated: blastdb is properly generated, thanks to the report by Milad

the HBVouroboros pipeline now takes the recommended form of a distrib…

…uted pipeline. Some features are temporarily disabled (including biokit support and genotype variant calling), which will be restored later when the pipeline is thoroughly tested.

trimmomatic support is added

version 0.6-1: HBVouroborous was tested both in dev virtual machine a…

…s well as in HPC cluster. The program was tested with multiple biokit output directories

works with biokit output dir