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Description
This issue collects changes to consider for the next major release.
See also the 2.0 milestone
Issues will be made for any changes that we commit to.
Ideas:
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Investigate whether intervalmapper, transcriptmapper, and variantmapper are obsolete. - move models to hgvs.models.*. (Move hgvs models to hgvs.models #583)
- make seqrepo dependency optional
- cleanup hgvs.easy
- remove six
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remove future imports(Remove __future__ module usage #688) - code reformat
- code restructure (src/, setup.cfg)
- verify that all dependencies are up-to-date. e.g., see python3.7 compatibility enum34 error #584
- improve consistency of error handling, esp. returning variant as-is v. exceptions when error is encountered (code currently does both)
External needs:
- SeqRepo raises error when coordinates are out-of-bounds
- SeqRepo make metadata accessible
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