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Move hgvs models to hgvs.models

Status: Open.

#583 In biocommons/hgvs;

· reece opened on Jan 14, 2020

Update <code>psycopg2</code> to <code>psycopg</code> (and make optional)

enhancementNew feature or requestNew feature or request

Status: Open.

#771 In biocommons/hgvs;

· theferrit32 opened on Apr 30, 2025

Reconcile the historical changelog at RTD and the new release notes at github

enhancementNew feature or requestNew feature or request

Status: Open.

#777 In biocommons/hgvs;

· reece opened on Jul 14, 2025

Remove <code>src/hgvs/decorators/lru_cache.py</code>

Status: Open.

#784 In biocommons/hgvs;

· jsstevenson opened on Aug 25, 2025

Add type hints to the code base

Status: Open.

#791 In biocommons/hgvs;

· anju24 opened on Sep 4, 2025

Uncertainty - SequenceVariant.is_uncertain

enhancementNew feature or requestNew feature or request

Status: Open.

#793 In biocommons/hgvs;

· davmlaw opened on Sep 4, 2025

Make data provider config explicit

Status: Open.

#645 In biocommons/hgvs;

· reece opened on Nov 12, 2022

Update / modernize packaging

Status: Open.

#691 In biocommons/hgvs;

· reece opened on Sep 14, 2023

Add a property to the new get_start_end method in position.py that allows to control strictness

enhancementNew feature or requestNew feature or request

Status: Open.

#796 In biocommons/hgvs;

· andreasprlic opened on Sep 5, 2025

untangle lru_cache and persistent cache

Status: Open.

#450 In biocommons/hgvs;

· reece opened on Jun 26, 2017

Use pytest parametrize instead of manual test loops

Status: Open.

#456 In biocommons/hgvs;

· reece opened on Aug 19, 2017

Use pytest fixtures rather than instantiating new objects

Status: Open.

#507 In biocommons/hgvs;

· reece opened on Jul 26, 2018

make data provider dependencies optional

Status: Open.

#199 In biocommons/hgvs;

· reece opened on Jul 19, 2014

Code cleanup for 2.0 release

Status: Open.

#559 In biocommons/hgvs;

· reece opened on Apr 21, 2019

Ruff format whole source

Status: Open.

#803 In biocommons/hgvs;

· davmlaw opened on Oct 9, 2025

c_to_p at intron/exon boundary where splice region is preserved

Status: Open.

#714 In biocommons/hgvs;

· b0d0nne11 opened on Dec 19, 2023

Making seqrepo optional

Status: Open.

#624 In biocommons/hgvs;

· kislyuk opened on Sep 23, 2021

p type cannot be validated

bugSomething isn't workingSomething isn't working

Status: Open.

#727 In biocommons/hgvs;

· markgene opened on Feb 7, 2024

Support transcript identifiers (in parentheses) in variants

Status: Open.

#735 In biocommons/hgvs;

· marius-mather opened on Apr 10, 2024

Normalized off transcript

bugSomething isn't workingSomething isn't working

Status: Open.

#766 In biocommons/hgvs;

· davmlaw opened on Apr 4, 2025

Formatting of extensions does not follow spec

bugSomething isn't workingSomething isn't working

Status: Open.

#804 In biocommons/hgvs;

· schorlton-bugseq opened on Oct 10, 2025

Parse uncertain c.HGVS names

keep aliveexempt issue from staleness checksexempt issue from staleness checks

Status: Open.

#801 In biocommons/hgvs;

· davmlaw opened on Sep 8, 2025