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Conda availability

enhancementNew feature or requestNew feature or request

Status: Open.

#27 In blachlylab/swiftover;

· Kekananen opened on Aug 6, 2021

Consider run-time defined bespoke file formats

enhancementNew feature or requestNew feature or request

Status: Open.

#26 In blachlylab/swiftover;

· jblachly opened on Mar 26, 2021

MAF format

enhancementNew feature or requestNew feature or request

Status: Open.

#23 In blachlylab/swiftover;

· jblachly opened on Nov 17, 2020

Would like contig name remapping

enhancementNew feature or requestNew feature or request

good first issueGood for newcomersGood for newcomers

help wantedExtra attention is neededExtra attention is needed

Status: Open.

#22 In blachlylab/swiftover;

· jblachly opened on Aug 21, 2020

Fail a VCF mapping if multiple hits

bugSomething isn't workingSomething isn't working

Status: Open.

#20 In blachlylab/swiftover;

· jblachly opened on Aug 27, 2019

GFF3 format

enhancementNew feature or requestNew feature or request

Status: Open.

#14 In blachlylab/swiftover;

· jblachly opened on May 28, 2019

Must gracefully handle contig not in map

bugSomething isn't workingSomething isn't working

Status: Open.

#13 In blachlylab/swiftover;

· jblachly opened on May 28, 2019

Multiple query (destination) mapping to same target (source) violates assumption

bugSomething isn't workingSomething isn't working

Status: Open.

#12 In blachlylab/swiftover;

· jblachly opened on May 28, 2019

embeddable julia or lua script for tag processing

enhancementNew feature or requestNew feature or request

Status: Open.

#8 In blachlylab/swiftover;

· jblachly opened on Apr 15, 2019

interval trees: use stdx.allocator / configurable memory alloc strategy

enhancementNew feature or requestNew feature or request

Status: Open.

#7 In blachlylab/swiftover;

· jblachly opened on Mar 19, 2019

Merge confluent output regions

enhancementNew feature or requestNew feature or request

Status: Open.

#5 In blachlylab/swiftover;

· jblachly opened on Mar 3, 2019