Assistant Researcher, UC Davis
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branchwater-web-MAGtest Public
Forked from USDA-ARS-GBRU/branchwater-web-MAGtestCodes and notes associated with testing branchwater-web by creating MAGs of 5 Refseq search results.
Python UpdatedSep 13, 2025 -
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shinyapps-deploy-github-action Public archive
Forked from BDSI-Utwente/shinyapps-deploy-github-actionR MIT License UpdatedJul 30, 2025 -
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K-mer_Biodiversity_Genomics_2025 Public
Forked from WCSCourses/K-mer_Biodiversity_Genomics_2025Introduction and advanced uses of k-mers in biodiversity genomics using modern k-mer tools and methods.
Other UpdatedJun 6, 2025 -
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2025-ncbi-rest-api Public
Forked from ctb/2025-ncbi-rest-apiGrabbing FTP paths & names for directsketch using the NCBI REST API, w00t
Python BSD 3-Clause "New" or "Revised" License UpdatedFeb 24, 2025 -
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sourmash_plugin_directsketch-feedstock Public
Forked from conda-forge/sourmash_plugin_directsketch-feedstockA conda-smithy repository for sourmash_plugin_directsketch.
Shell BSD 3-Clause "New" or "Revised" License UpdatedOct 5, 2024 -
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2024-summarize-assembly-mapping Public
Forked from ctb/2024-summarize-assembly-mappingJupyter Notebook BSD 3-Clause "New" or "Revised" License UpdatedSep 13, 2024 -
bluegenes.github.io Public
Forked from mmistakes/minimal-mistakesA responsive Jekyll theme with clean typography and support for large full page images.
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2024-debug-gather-difference Public
Forked from ctb/2024-debug-gather-differenceJupyter Notebook BSD 3-Clause "New" or "Revised" License UpdatedJun 14, 2024 -
staged-recipes Public
Forked from conda-forge/staged-recipesA place to submit conda recipes before they become fully fledged conda-forge feedstocks
Python BSD 3-Clause "New" or "Revised" License UpdatedJun 5, 2024 -
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2021-simseq-compare Public
evaluate sourmash distance estimation using simulated sequences
Jupyter Notebook UpdatedSep 7, 2023
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