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@leexgh leexgh commented Nov 5, 2024

Fix: cBioPortal/cbioportal#11150
Get Sift and Polyphen data from the selected/active transcript, instead of always getting from the first transcript.
Testing: add Functional Impact column in mutation table (link)

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@leexgh leexgh added the bug label Nov 5, 2024
@leexgh leexgh force-pushed the fix-sift-polyphen branch from eb00ee3 to 8fcef5f Compare November 5, 2024 23:09
@leexgh leexgh requested a review from onursumer November 5, 2024 23:22
@leexgh leexgh force-pushed the fix-sift-polyphen branch from 8fcef5f to 77a500e Compare November 6, 2024 22:03
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LGTM!

} from 'shared/cache/GenomeNexusCache';
import _ from 'lodash';
import { shouldShowMutationAssessor } from 'shared/lib/genomeNexusAnnotationSourcesUtils';
import { selected } from 'pages/studyView/table/tables.module.scss';
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ideally shared components should not import from pages, but we probably broke that convention many times already, so not a big deal.

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Actrually this is an unused import. Removed this line.

Show Sift and Polyphen by different transcript
@onursumer onursumer merged commit 84108c1 into cBioPortal:master Nov 11, 2024
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For functional impact show gray benign dot

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