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a lightweight bam file depth statistical tool

C 157 50 Updated Sep 13, 2024

Python library to parse, format, validate, normalize, and map sequence variants according to HGVS Nomenclature (https://hgvs-nomenclature.org/).

Python 285 98 Updated Nov 1, 2025

The Ensembl Variant Effect Predictor predicts the functional effects of genomic variants

Perl 509 165 Updated Oct 17, 2025

利用AI大模型,一键生成高清短视频 Generate short videos with one click using AI LLM.

Python 47,432 6,625 Updated Jun 11, 2025

Copy number variant detection from targeted DNA sequencing

Python 587 176 Updated Aug 13, 2025

online image editor

JavaScript 3,087 705 Updated Aug 19, 2025

Strelka2 germline and somatic small variant caller

C++ 385 108 Updated Dec 29, 2021

NeuSomatic: Deep convolutional neural networks for accurate somatic mutation detection

Python 171 52 Updated Dec 23, 2021

HGVS variant name parsing and generation

Python 175 78 Updated Jun 14, 2023

Basic UPD caller

Python 12 3 Updated Aug 23, 2021

Singularity has been renamed to Apptainer as part of us moving the project to the Linux Foundation. This repo has been persisted as a snapshot right before the changes.

Go 2,591 425 Updated Oct 10, 2022

phenotype-based prioritization of candidate genes for human diseases

Perl 65 34 Updated Jan 25, 2023

Phenotype driven gene prioritization for HPO

Python 50 15 Updated Jul 26, 2021

A Tool to Annotate and Prioritize Exome Variants

Java 232 54 Updated Oct 30, 2025

A bioinformatics software tool for clinical interpretation of genetic variants by the 2015 ACMG-AMP guideline

Python 198 92 Updated May 28, 2023