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Mixed Models for Repeated Measures (MMRM) in R.

R 153 24 Updated Dec 14, 2025

TCRconv is a deep learning model for predicting recognition between T cell receptors and epitopes. It uses protBERT embeddings for the TCRs and convolutional neural networks for the prediction.

Jupyter Notebook 25 6 Updated Oct 18, 2022

Deep Learning based cell composition analysis with Scaden.

Python 85 30 Updated Nov 5, 2024

A Python package following the scikit-learn API for model-based clustering and generalized mixture modeling (latent class/profile analysis) of continuous and categorical data. StepMix handles missi…

Python 82 6 Updated Jul 14, 2025

A Python implementation of the DESeq2 pipeline for bulk RNA-seq DEA.

Python 708 79 Updated Dec 15, 2025

🧠 A study guide to learn about Transformers

1,623 162 Updated Jun 3, 2023

ALICE (Automated Learning and Intelligence for Causation and Economics) is a Microsoft Research project aimed at applying Artificial Intelligence concepts to economic decision making. One of its go…

Jupyter Notebook 4,430 794 Updated Dec 19, 2025
Python 8 2 Updated Jul 18, 2022

R implementation of effect measure modification-extended regression-based closed-formula causal mediation analysis

R 30 7 Updated Nov 14, 2025

A temporary email right from your terminal written in POSIX sh

Shell 4,151 167 Updated Aug 17, 2024

borb is a library for reading, creating and manipulating PDF files in python.

Python 3,550 156 Updated Dec 18, 2025

LCA implementation for python

Jupyter Notebook 42 12 Updated Apr 6, 2022

Linux kernel module to control and monitor NZXT liquid coolers

C 90 13 Updated Jul 4, 2018

Create "Table 1" for research papers in Python

Python 187 47 Updated Apr 26, 2025

A flexible, intuitive and fast forecasting library

Python 1,852 105 Updated Feb 20, 2025

Pathway enrichment and expression analysis as well as species comparison tool

Java 3 6 Updated Nov 13, 2025

Package for assessment of calibration in binomial prediction models.

Jupyter Notebook 4 1 Updated Jul 6, 2024

Deprecated. For the latest MIMIC-IV code, please refer to: https://github.com/MIT-LCP/mimic-code

Python 291 102 Updated Jun 17, 2021

Free monospaced font with programming ligatures

Clojure 80,778 3,172 Updated Dec 6, 2025

Reading great papers in the history of artificial intelligence and machine learning

10 1 Updated Oct 26, 2022

A formatter for Python files

Python 13,975 901 Updated Dec 15, 2025

Replication of the arterial line study in MIMIC-IV

Jupyter Notebook 75 36 Updated Oct 19, 2021

The msm R package for continuous-time multi-state modelling of panel data

R 65 17 Updated Jul 7, 2025

Data extraction for the analysis of ventilator-free-days.

TSQL 2 Updated Jun 29, 2020

Code and plots for submissions to the #tidytuesday challenge

R 751 113 Updated Dec 18, 2025

🤗 Transformers: the model-definition framework for state-of-the-art machine learning models in text, vision, audio, and multimodal models, for both inference and training.

Python 154,087 31,495 Updated Dec 20, 2025
Jupyter Notebook 290 131 Updated Jun 20, 2023
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