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Commits on Nov 3, 2025

• Bump Emu version (#9332)

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Commits on Nov 1, 2025

• Update mmseqs modules to v18 (#9331)

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Commits on Aug 13, 2025

• Fix CheckM2 database download (#8885)

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Commits on Jun 23, 2025

• Update hostile modules (#8688)

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Commits on Jun 3, 2025

• nanoq: fix output path (#8596)

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Commits on May 25, 2025

• Update catpack/download and /prepare process labels (#8547)

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Commits on May 22, 2025

• Improve catpack/download output structure (#8534)

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  jfy133

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Commits on May 21, 2025

• Fix catpack/download command (#8528)

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Commits on May 16, 2025

• Update version extraction command in BUSCO module (#8482)

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Commits on May 14, 2025

• catpack/bins: Add bin_suffix as input (#8456)

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Commits on Mar 14, 2025

• Update CheckM2, add stub tests (#7794)

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  SPPearce

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Commits on Mar 12, 2025

• BUSCO update and improvements (#7784)

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Commits on Mar 3, 2025

• Krona module updates (#7489)

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Commits on Feb 17, 2025

• BUSCO: Expose log as output and add parameter to remove intermediate files (#7470)

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Commits on Jan 8, 2025

• Bump csvtk and change stageIn pattern of csvtk/concat (#7267)

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Commits on Dec 31, 2024

• CheckM2 module updates (#7259)

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Commits on Dec 15, 2024

• Add busco downloads as output (#7210)

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Commits on Dec 12, 2024

• Make busco/busco `seq_dir` output optional (#7203)

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Commits on Dec 11, 2024

• Update BUSCO module (#7199)

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Commits on Dec 1, 2024

• checkm/qa: Improve input validation (#7119)

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  sateeshperi

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Commits on Nov 26, 2024

• Bump GUNC and add gunc/run test (#6920)

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  edmundmiller

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Commits on Nov 5, 2024

• Bump checkm/qa version (#6919)

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  LeonHafner

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Commits on Sep 25, 2024

• Refactor checkm2/databasedownload using aria2 (#6654)

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Commits on Jun 13, 2024

• Update ChekmM2 to 1.0.2 (#5796)

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Commits on Dec 8, 2023

• Add CheckM2 module (#4057)

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Commits on Oct 19, 2023

• Add nf-test to nanoplot, and bump version (#4098)

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• Add nf-test to medaka (#4155)

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  koenbossers

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• Add nf-test to BWA modules (#4140)

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Commits on Oct 18, 2023

• Add nf-test to FastANI (#4147)

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