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ESKRIM is a reference-free tool that compares microbial richness in shotgun metagenomic samples by counting k-mers
CroCoDeEL is a tool that detects cross-sample contamination in shotgun metagenomic data
Meteor is a plateform for quantitative metagenomics profiling of complex ecosystems. Meteor relies on genes catalogue to perform species-level taxonomic profiling (Bacteria, Archaea and Eukaryotes)…
Scripts and modules for training and testing neural network for ECG automatic classification. Companion code to the paper "Automatic diagnosis of the 12-lead ECG using a deep neural network".
Collection of bioinformatics training materials
1st place algorithm from Melbourne-University AES-MathWorks-NIH Seizure Prediction Challenge
A tool to find sequencing data and metadata from public databases.
subpixel: A subpixel convnet for super resolution with Tensorflow
phyloseq is a set of classes, wrappers, and tools (in R) to make it easier to import, store, and analyze phylogenetic sequencing data; and to reproducibly share that data and analysis with others. …