Bioinformatics pipelines for the Resolwe dataflow package for Django framework.

Read about getting started and how to write processes in the documentation.

Make sure you have Python 3.10 or later installed on your system. If you don't have it yet, follow these instructions.

pip install resolwe-bio

To install a pre-release, use:

pip install --pre resolwe-bio

pip install --pre https://github.com/genialis/resolwe-bio/archive/<git-tree-ish>.tar.gz

where <git-tree-ish> can represent any commit SHA, branch name, tag name, etc. in Resolwe Bioinformatics' GitHub repository. For example, to install the latest Resolwe Bioinformatics from the master branch, use:

pip install --pre https://github.com/genialis/resolwe-bio/archive/master.tar.gz

We welcome new contributors. To learn more, read Contributing section of the documentation.