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  • The Walter and Eliza Hall Institute of Medical Research
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Accurate, easy and integrated suit to compare RNA samples with different degradation levels, quantify decay rates per-transcript and correct for degradation-induced artifacts in differential gene/t…

Python 7 Updated Nov 22, 2024
R 16 3 Updated Apr 18, 2025
Python 59 24 Updated Sep 27, 2021

CRISPR Indel, base edit analysis

Python 11 5 Updated Aug 1, 2020

Modelling insertion efficiency for Prime Insertion Experiments

Python 13 3 Updated Apr 1, 2024

CRISPRAnalyzeR: interactive analysis, annotation and documentation of pooled CRISPR screens

HTML 82 30 Updated May 21, 2020

Analysis of screening data from base editor screens

Jupyter Notebook 9 4 Updated Feb 10, 2022

CytofRUV: Removing unwanted variation to integrate multiple CyTOF datasets.

R 7 3 Updated Aug 1, 2022

Package Development tutorial for useR! 2019 Toulouse

R 88 27 Updated Sep 24, 2019

for a tutorial at useR2018

HTML 17 8 Updated Jul 9, 2018

Glimma R package

R 50 10 Updated Sep 2, 2024

An R/Bioconductor package that implements a single-sample molecular phenotyping approach

R 46 6 Updated Oct 13, 2025

R-Ladies London presentations and code snippets demonstrated during meetups

HTML 35 13 Updated Oct 24, 2019

GRIDSS: the Genomic Rearrangement IDentification Software Suite

Java 280 73 Updated May 21, 2025

Easy interactive web applications with R

R 5,576 1,878 Updated Dec 16, 2025

Analysis pipeline for cancer sequencing data

R 112 31 Updated Apr 30, 2025

Internet of Tents demos and how to files.

C++ 4 Updated Nov 26, 2016

Solutions for the Advanced R Development book

R 65 49 Updated Oct 19, 2017

Rmd source files for the HarvardX series PH525x

R 2,120 1,958 Updated Feb 12, 2024

Advanced R: a book

TeX 2,436 1,709 Updated Mar 13, 2025