Welcome to the dartR wiki!

Version 2.0.4 (dartR 2.0)

Lots of new functions. Best to read publication in Methods in Ecology and Evolution (Mijango, Gruber, Pacioni, Berry, Georges 2022, in press)

Version 1.9.9.10 (dev_bernd)

• Added functions to run structure (and clumpp) from within R based on genlight objects
• gl.map.structure: a spatial structure output is now possible

Version 1.0.5

Added a script to output a file suitable for input to TreeMix (gl2treemix)

Revised the scripts for fixed difference analysis, to include simulations to estimate the probability of false positives, given the sample sizes in pairwise comparisons.

Added a script to output a file suitable for input to the SDVquartets function of PAUP*

Added functions to drop populations and individuals from a gl object (or keep selected populations). Also for individuals.

Vignette updated

Version 1.0.2
new functions to update loc.metrics
new function gl.sexlinkage to identify sex linked markers

Vignette updated

Version 1.0 - latest dartR CRAN version.
just minor tweaks.

Version 0.94
new function gl2shp Converts a genlight object with coordinates to a ESRI spatial point file (shp)

Version 0.93
Bug fixes in vignette (no parallel runs on build) [New CRAN version]

Version 0.91
new function gl.report.pa Report number of private alleles possessed by an individual of unknown provenance new function gl.assign Assign an individual of unknown provenance to population

Version 0.84
new function gl.ibd to calculate isolation by distance

Version 0.83
new function gl.report.ld (linkage disequilibrium per population)
new function gl.hwe.pop (fast hardy-weinberg test over loci and populations)

Version 0.82
new function gl.outflank (integrated into dartR now, no need to install via github)

Version 0.81
new function gl.assign and gl.report.pa to report private alleles and assign individuals to population based on private alleles

Version 0.80
Initial CRAN version