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COG

Usage

cog.py [-h] -i INPUT_FILES [INPUT_FILES ...] -db LOCAL_DB -o OUTPUT_FILES [-t THREADS_NUM]

A script to annotate A list of Genomes with COG database and Enrichment Analysis

optional arguments: -h, --help show this help message and exit

-i INPUT_FILES [INPUT_FILES ...] input genome file in fasta(required)

-db LOCAL_DB local COG database dir(required)

-o OUTPUT_FILES the output dir(required)

-t THREADS_NUM the num of threads

Dependency

1.Blast(best Diamond)

2.Python2

3.SciPy

4.Seaborn

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A script to annotate and analysis genome with COG database

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