Fix sed usage in custom annotator test

…d-configuration

Fix WebAssembly build setup

…x_tools_to_path.sh

Fix path script for modern find

Fix newline issues in ignore files

…ing-logic

Improve alignment checker memory usage

…-output

Make haplotype extractor debug optional

…s.txt-and-dockerfile

Add missing newline at EOF

…or-drop-library

Add reusable utilities to vcfx_core

…s-files-line-by-line

Refactor VCFX_merger to stream variants

…date-yaml-in-workflows

Fix YAML workflow files

…project

Add CI workflow for building and testing

…ompressed-streams

Add gzip input support

Switch docs/tests to public container

…ble-in-test_docker.sh

Make Docker tests optional

…packaging

Fix Python bindings

Fix Docker build dependencies

Add Python wrappers and wheel CI

Extend Python bindings

…commands

Add docs command to vcfx wrapper

Fix YAML syntax

…on - Removed generated site/ directory (build artifact) - Fixed broken link in docs/docker.md - Fixed navigation structure in mkdocs.yml (moved VCFX_haplotype_extractor to proper Data Processing section) - Documentation builds successfully with mkdocs

Enable non-root installs

…n-parsing

Fix Python setup version parsing

…_vcfx

Fix Python bindings fallback

…vcfx-command

Fix workflow PATH handling

…flow-for-python-setup

Use setup-python in build workflow

…ctions-for-virtual-environment

Update docs to recommend virtual env

…setter

Fix heredoc delimiter in build workflow

…uild-test.yml

Fix YAML build-test workflow