Python library for finding the optimal transformation(s) that makes two matrices as close as possible to each other.

GTDB-Tk: a toolkit for assigning objective taxonomic classifications to bacterial and archaeal genomes.

Population genomics from metagenomes

An analysis and visualization platform for 'omics data

Aggregate results from bioinformatics analyses across many samples into a single report.

Bayesian Data Analysis demos for R

UTK Bioinformatics Applications

Graphical analysis of structural causal models / graphical causal models.

Code, unit tests, and tutorials for running PICRUSt2

Make Picrust2 Output Analysis and Visualization Easier

SourceTracker2

R package for microbiome data visualization and statistics. Uses phyloseq, vegan and the tidyverse. Docker image available.

Assess the quality of microbial genomes recovered from isolates, single cells, and metagenomes

A dynamic database of fungal trait measurements

Look Up Guild Information for Fungi in R

Threshold Indicator Taxa Analysis

Parsing, Manipulation, and Visualization of Metabarcoding/Taxonomic data

R package offering functionality for the advanced analysis of microbial flow cytometry data

FAST is an Amplicon Sequencing Toolbox v1.2

AnnotationBustR