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SARTools Public
Forked from PF2-pasteur-fr/SARToolsStatistical Analysis of RNA-Seq Tools
R UpdatedJun 13, 2023 -
nextflow Public
Forked from nextflow-io/nextflowA DSL for data-driven computational pipelines
Groovy Apache License 2.0 UpdatedJun 7, 2023 -
tools Public
Forked from nf-core/toolsPython package with helper tools for the nf-core community.
Python MIT License UpdatedJun 6, 2023 -
MultiQC Public
Forked from MultiQC/MultiQCAggregate results from bioinformatics analyses across many samples into a single report.
Python GNU General Public License v3.0 UpdatedJun 3, 2023 -
methylartist Public
Forked from adamewing/methylartistTools for plotting methylation data in various ways
Python MIT License UpdatedMay 31, 2023 -
nextflow-training Public
Forked from ewels/trainingDevelopment fork. See main repo here:
Nextflow Other UpdatedApr 26, 2023 -
methylKit Public
Forked from al2na/methylKitR package for DNA methylation analysis
R UpdatedApr 26, 2023 -
MethylC-analyzer Public
Forked from RitataLU/MethylC-analyzerPython GNU General Public License v3.0 UpdatedApr 24, 2023 -
DAMEfinder Public
Forked from markrobinsonuzh/DAMEfinderFinds DAMEs - Differential Allelicly MEthylated regions
R MIT License UpdatedApr 4, 2023 -
nf-core-rnaseq Public
Forked from ewels/nf-core-rnaseqSee the main fork of this repository here >>>
Nextflow MIT License UpdatedMar 7, 2023 -
nf-core-methylseq Public
Forked from ewels/nf-core-methylseqSee the main fork of this repository here >>>
Nextflow MIT License UpdatedMar 7, 2023 -
Bismark Public
Forked from ewels/BismarkSee the main fork here:
HTML GNU General Public License v3.0 UpdatedNov 10, 2022 -
CluBCpG Public
Forked from waterlandlab/CluBCpGCluster-based analysis of CpG methylation
Python MIT License UpdatedNov 9, 2022 -
introduction-to-python Public
Forked from mrastgoo/introduction-to-pythonintroduction to python
Jupyter Notebook UpdatedAug 25, 2022 -
phaser Public
Forked from secastel/phaserphasing and Allele Specific Expression from RNA-seq
Python GNU General Public License v3.0 UpdatedMay 11, 2022 -
Methylr2py Public
Forked from FAU-DLM/Methylr2pyPython wrapped R packages for methylation array analysis
Jupyter Notebook UpdatedAug 23, 2021 -
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MeDIP-seq Public
Forked from skinnerlab/MeDIP-seqA set of scripts and functions for analyzing MeDIP-seq datasets
R UpdatedFeb 17, 2021 -
MethGET Public
Forked from Jason-Teng/MethGETWeb-based bioinformatics software for correlating genome-wide DNA methylation and gene expression
Python UpdatedJan 17, 2021 -
REHeader Public
Forked from khalby786/REHeaderGenerate beautiful header images for your GitHub profile READMEs.
HTML MIT License UpdatedOct 10, 2020 -
bionitio-python Public
Forked from ewels/bionitio-pythonDemonstrating best practices for bioinformatics command line tools
Python MIT License UpdatedJul 23, 2020 -
TrimGalore Public
Forked from ewels/TrimGaloreA wrapper around Cutadapt and FastQC to consistently apply adapter and quality trimming to FastQ files, with extra functionality for RRBS data
Perl GNU General Public License v3.0 UpdatedApr 12, 2018
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