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An end-to-end machine learning pipeline template with built-in explainability

Python 10 8 Updated May 1, 2025

PyQT based GUI to classify the plant disease classification. Model is trained on Kaggle data.

Python 1 Updated Mar 21, 2023

Here we are going to discuss variant calling on human datasets using GATK Best practices pipeline

Shell 43 13 Updated Jan 17, 2024

Seq2Neo: a comprehensive pipeline for cancer neoantigen immunogenicity prediction

Python 21 2 Updated Feb 17, 2023

📱 ✅ Some awesome projects in python! 📱 ✅

Jupyter Notebook 1,323 351 Updated Jul 31, 2024

Molecular bloom filter tool

Python 126 14 Updated Aug 19, 2025

This deals with EDA and building various ML models using sklearn: KNeighborsRegressor DecisionTreeRegressor RandomForestRegressor,AdaBoostRegressor LinearRegression, Ridge,Lasso, etc and HP using r…

Jupyter Notebook 1 Updated Mar 21, 2023

It is POC project, using Nextflow to run ML pipeline

Nextflow 1 Updated Mar 21, 2023

Its is an End-to-End Random forest implementation includes data preprocessing [ cleaning, feature selection and engineering],EDA, hyperparameter tuning, Model interpretation with uncertainty and pr…

Jupyter Notebook 1 Updated Feb 21, 2022

MolPro is a comprehensive python package for small molecule generation using protein active site or/and similar molecules using 3D information of molecules with in-silico validation of molecules by…

Python 2 Updated Apr 16, 2022

The simplest, fastest repository for training/finetuning medium-sized GPTs.

Python 48,656 8,132 Updated Dec 9, 2024

Collection of bioinformatics training materials

Python 1,068 189 Updated Oct 26, 2025

A collection of scientific methods, processes, algorithms, and systems to build stories & models.

Jupyter Notebook 3,656 699 Updated Oct 19, 2025

List of AI Residency Programs

3,228 269 Updated Apr 4, 2025

Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking

Python 1,358 321 Updated May 2, 2025

Notebooks for the Practicals at the Deep Learning Indaba 2022.

Jupyter Notebook 178 45 Updated Apr 3, 2024

Learn ML engineering for free in 4 months! Register here 👇🏼

Jupyter Notebook 12,172 2,767 Updated Nov 1, 2025

Graph4nlp is the library for the easy use of Graph Neural Networks for NLP. Welcome to visit our DLG4NLP website (https://dlg4nlp.github.io/index.html) for various learning resources!

Python 1,688 206 Updated Jun 24, 2024

OmniXAI: A Library for eXplainable AI

Jupyter Notebook 953 105 Updated Jul 23, 2024
Python 134 32 Updated Jun 18, 2025

Workflow for SARS-CoV-2 genome Assembly at FioCruz/IAM

Python 29 14 Updated Feb 6, 2024

The fastai book, published as Jupyter Notebooks

Jupyter Notebook 24,019 9,240 Updated Aug 16, 2024

PyTorch Tutorials from my YouTube channel

Python 1,875 1,213 Updated Nov 6, 2023

A tool for evaluating the predictive performance on activity cliff compounds of machine learning models

Python 195 25 Updated Feb 15, 2025
Jupyter Notebook 1 Updated Apr 24, 2022