-
platypusfarm Public
lab website, software, tutorials, and related material
-
-
primalscheme Public
Forked from aresti/primalschemea tool for designing primer panels for multiplex PCR.
-
metapigs Public
data workflows for pig probiotic & antibiotic trials metagenome analysis
-
graphdeconvolution Public
deconvolution of species & strain genome mixtures in assembly graphs
-
repeatoire Public
constructs local multiple alignments of repeat families
C GNU General Public License v3.0 UpdatedNov 15, 2020 -
strain3C Public
inference of strain genomes from metagenomic Hi-C data
-
mauveAligner Public
command-line interface software for genome alignment
-
mauve Public
A genome alignment and visualization system
-
-
libMems Public
a genome alignment library built around seed-and-extend algorithms for maximal exact and unique matches
C++ GNU General Public License v2.0 UpdatedNov 15, 2020 -
libGenome Public
Deprecated library for genome sequence file I/O
C++ GNU General Public License v2.0 UpdatedNov 15, 2020 -
muscle Public
library refactorization of the MUSCLE aligner by Robert Edgar
C++ Other UpdatedDec 29, 2019 -
cqf Public
Forked from splatlab/cqfA General-Purpose Counting Filter: Counting Quotient Filter
C BSD 3-Clause "New" or "Revised" License UpdatedOct 10, 2019 -
santa-sim Public
Forked from santa-dev/santa-simA forward-time simulator for gene sequences modeling a variety of mutation and selection processes.
-
proxigenomics Public
Hi-C analysis of heterogeneous samples
-
docker-A5-miseq Public
a docker container for benchmarking A5-miseq in nucleotid.es
-
DESMAN Public
Forked from chrisquince/DESMANDe novo Extraction of Strains from MetAgeNomes
-
megahit Public
Forked from voutcn/megahitMEGAHIT: An ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph
Cuda GNU General Public License v3.0 UpdatedNov 17, 2016 -
pystan Public
Forked from stan-dev/pystan2PyStan: Python interface to Stan
-
-
-
3Creview Public
analysis & scripts for evaluating 3C & HiC datasets
-
-
-
assembler-list Public
Forked from nucleotides/nucleotides-dataList of assemblers to be evaluated.
Shell UpdatedSep 13, 2014 -
angus Public
Forked from ngs-docs/angusMaterials for Analyzing Next-Generation Sequencing (ANGUS) course.
UpdatedAug 14, 2014 -
-
{{ message }}