Starred repositories
3D Slicer extension containing a slicelet that covers the gel dosimetry analysis workflow used in commissioning new radiation techniques and to validate the accuracy of radiation treatment by enabl…
Tool for robust segmentation of >100 important anatomical structures in CT and MR images
Python package that contains tools for internationalization of applications that use Python and Qt
A cmake buildsystem for compiling Python
Client side integration example source code and libraries for AI-Assisted Annotation SDK
Implementation of the Jupyter kernel protocol in C++
Slicer modules for evaluating pose tracking error using a ground truth pose tracker
Extension for 3D Slicer that allows connecting and receiving/sending data from/to Arduino boards (or similar)
Set of tools to help developers when creating new Slicer extensions
A 3D Slicer extension for measuring the volume of breast implants
Utility extension for 3D Slicer, containing tools and algorithms for building image guided surgery applications
This repository contains the SlicerFreeSurferImporter extension for 3D Slicer. The extension implements a module for importing models, scalar overlays, and segmentations from FreeSurfer, as well as…
Extension for 3D Slicer containing various tools for module development and debugging
3D Slicer extension for exporting Slicer scenes to use in the OpenAnatomy.org browser
Simple Scripted Module to batch process patients in 3D Slicer
This extension makes available Elastix medical image registration toolkit (http://elastix.isi.uu.nl/) available in Slicer.
3D Slicer extension containing a slicelet called Film Dosimetry Analysis. It is a 2D dosimetry tool used in commissioning new radiation techniques and to validate the accuracy of radiation treatmen…
Segmentation-based measurements with DICOM import and export of the results.
3D Slicer extension for cardiac analysis
Modules supporting image-guided interventions in 3D Slicer.
A Slicer extension that enables user to interact with a Slicer scene using virtual reality.
dcmqi (DICOM for Quantitative Imaging) is a C++ library for conversion between imaging research formats and the standard DICOM representation for image analysis results
Extension for 3D Slicer that allows the application to be used from Jupyter notebook
Diffusion MRI analysis and visualization in 3D Slicer open source medical imaging platform.
Multi-platform, free open source software for visualization and image computing.
Software library for data acquisition, pre-processing, and calibration for navigated image-guided interventions.
Open-source toolkit for radiation therapy research, an extension of 3D Slicer. Features include DICOM-RT import/export, dose volume histogram, dose accumulation, external beam planning (TPS), struc…
Insight Toolkit (ITK) -- Official Repository. ITK builds on a proven, spatially-oriented architecture for processing, segmentation, and registration of scientific images in two, three, or more dime…