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Achievements

Achievement: Pair ExtraordinaireAchievement: Pull Shark

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paddyharker1005/README.md

Bio

Bioinformatician. I am interested in pipeline development, NGS data analysis and machine learning.

Programming languages

  • R
  • Python
  • Bash
  • SQL

Workflow managers

  • Nextflow
  • Snakemake (working knowledge)

Pinned Loading

  1. cruk-mi/mesa cruk-mi/mesa Public

    mesa package for Methylation Enrichment Sequencing Analysis

    R 14 3

  2. BSc_Scerevisiae_RBP_motifs_in_Calbicans_2021 BSc_Scerevisiae_RBP_motifs_in_Calbicans_2021 Public

    Analysis of S. cerevisiae RBP motifs in of CDS and UTRs of C.albicans genes

    HTML 1 1

  3. BPSM_protein_sequence_analysis_pipeline_MSc_assignment2 BPSM_protein_sequence_analysis_pipeline_MSc_assignment2 Public

    A Python3 pipeline that, based on a user-defined protein family and taxonomic group, retrieves relevant full protein sequences from the NCBI protein database and performs multiple protein-specific …

    Python

  4. MSc_CancerEnhancers_2022 MSc_CancerEnhancers_2022 Public

    Analysis scripts used for SOX2/SOX9 ChIP-seq data processing and integration on the Eddie Mark 3 HPC cluster.

    Shell

  5. nf-core/modules nf-core/modules Public

    Repository to host tool-specific module files for the Nextflow DSL2 community!

    Nextflow 389 950