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@pfenninglab

Pfenning Lab

Genetic and Epigenetic data processing code from the Pfenning Lab at Carnegie Mellon University

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  1. halLiftover-postprocessing halLiftover-postprocessing Public

    Python 22 5

  2. TACIT TACIT Public

    OCR-Phenotype Association from Tissue-Aware Conservation Inference Toolkit

    Shell 18 2

  3. OCROrthologPrediction OCROrthologPrediction Public

    This repository contains models and code for predicting open chromatin status of OCR orthologs.

    Shell 3

  4. addiction_gwas_enrichment addiction_gwas_enrichment Public

    Scripts and data generated for the addiction GWAS enrichment and subsequent analyses.

    HTML 2 1

  5. Logan_Striatum_snRNA-seq Logan_Striatum_snRNA-seq Public

    Single cell transcriptomics analyses in the striatum of patients with OUD

    HTML 2 1

  6. ml-prototypes ml-prototypes Public

    Jupyter Notebook 1

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