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DB_QZ_multiome Public
Multiome (RNA+ATAC from same cell) data generated by Qinyu Zhang in David Bryder's lab. Paper here: https://doi.org/10.7554/eLife.91826.2
Python MIT License UpdatedMar 4, 2024 -
SSOmaker Public
A Shiny webapp for creating a Seurat object without programming expertise. Load a count matrix directory, interactively filter on metadata, view results, download Seurat object and results of diffe…
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DB_AKC_citeseq Public
Accompanying code for analysis of manuscript in Nature Aging: Implications of stress-induced gene expression for hematopoietic stem cell aging studies
HTML MIT License UpdatedJan 16, 2024 -
CB_lab_cookiecutter Public
Template to generate analysis project structure for bioinformaticians in the Charlotta Böijers lab at Lund University.
Python MIT License UpdatedAug 7, 2023 -
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CB_FL Public
Accompanying code for: Single-cell multiomics of human fetal hematopoiesis defines a developmental specific population and a fetal signature
R UpdatedJun 28, 2023 -
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scarf-1 Public
Forked from parashardhapola/scarfToolkit for highly memory efficient analysis of single-cell RNA-Seq, ATAC-Seq and CITE data. Analyze atlas scale datasets with millions of cells on laptop.
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python-interrogate-check Public
Forked from JackMcKew/python-interrogate-checkGitHub Action for use with python package interrogate
Shell MIT License UpdatedJun 1, 2021 -
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adventofcode2020 Public
My solutions to this year's Advent of Code https://adventofcode.com/2020
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Apollo Public
Forked from GMOD/ApolloGenome annotation editor with a Java Server backend and a Javascript client that runs in a web browser as a JBrowse plugin.
Groovy Other UpdatedOct 28, 2020 -
nabo Public
Forked from parashardhapola/naboPython library to perform memory efficient cross-sample cell mapping using single cell transciptomics (scRNA-Seq) data
Python BSD 3-Clause "New" or "Revised" License UpdatedOct 2, 2020 -
docker-stacks Public
Forked from jupyter/docker-stacksReady-to-run Docker images containing Jupyter applications
Python Other UpdatedAug 17, 2020 -
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fullPage.js Public
Forked from alvarotrigo/fullPage.jsfullPage plugin by Alvaro Trigo. Create full screen pages fast and simple
JavaScript GNU General Public License v3.0 UpdatedApr 5, 2020 -
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hallo-hugo Public
Forked from EmielH/hallo-hugoHallo is a single-page Hugo theme to introduce yourself.
HTML MIT License UpdatedJun 19, 2019 -
gohugo-theme-ananke Public
Forked from theNewDynamic/gohugo-theme-anankeAnanke: A theme for Hugo Sites
HTML MIT License UpdatedJun 18, 2019 -
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MyFirstApp Public
My first Android app. It's done as a part of an assignment of a course at LTH, namely [MAMN01]
Java UpdatedApr 6, 2016 -
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