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Build and deploy stateful agents across federated resources

Python 58 2 Updated Oct 24, 2025

CORAL: A framework for rigorous self-validated data modeling and integrative, reproducible data analysis

Python 8 3 Updated Oct 23, 2025

A simple registry for KGHub projects

Python 18 4 Updated Oct 21, 2025
Python 36 7 Updated Oct 26, 2025

Datasheets for Datasets, as LinkML Schema

Jupyter Notebook 4 2 Updated Sep 17, 2025

Dashboard visualizations for KG-Hub projects.

Vue 1 Updated Dec 11, 2023

A package to transform all OBO ontologies into KGX TSV format and OBO json, and put the transformed graph in KGhub

Python 32 2 Updated Mar 19, 2024

A graph for accessing and comparing knowledge concerning phenotypes across species and genetic backgrounds.

Python 5 4 Updated Oct 14, 2025
Python 2 Updated Feb 15, 2025
HTML 8 Updated Dec 30, 2024

LLM-driven curation assist tool

Jupyter Notebook 96 17 Updated Oct 20, 2025
Jupyter Notebook 20 3 Updated Oct 25, 2025

LLM-based gene function enrichment tool

Jupyter Notebook 14 1 Updated Feb 19, 2025

An ontology modeling classes and relationships describing deep learning networks, their component layers and activation functions, machine learning methods, as well as AI/ML potential biases.

Jupyter Notebook 37 7 Updated Nov 12, 2024

LinkML rendering of model cards

Python 3 1 Updated Apr 8, 2025
Jupyter Notebook 2 1 Updated Oct 19, 2021

Ontology Access Kit: A python library and command line application for working with ontologies

Python 154 30 Updated Jun 5, 2025

EBIC - AI-based parallel biclustering algorithm

C++ 20 4 Updated Sep 25, 2018

Ultra-deep search for novel viruses

Jupyter Notebook 272 34 Updated Mar 29, 2023
Shell 41 8 Updated Mar 13, 2024

Linked Open Data Modeling Language

Python 424 134 Updated Oct 23, 2025

Tools for working with KGCL

Python 18 9 Updated Nov 19, 2024

The source code of Infectious Disease Ontology (IDO)

6 2 Updated May 13, 2020

Python toolkit for SSSOM mapping format

Python 56 14 Updated Oct 26, 2025

A structured controlled vocabulary for the anatomy of fungi

Makefile 10 4 Updated Jul 15, 2025

Data transformation framework for LinkML data models

Python 59 5 Updated Oct 23, 2025

Bayesian OWL ontology merging

Scala 32 2 Updated Jun 4, 2025

OHMI: The Ontology of Host-Microbiome Interactions

Makefile 12 6 Updated Apr 19, 2022
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