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pyFoldX: python bindings for FoldX.
Stand Alone version of ConSurf with detailed tutorial - (installation + database + usage)
web-based protein structure viewer and analysis tool interactively or in batch mode
Profiling Protein Structures from Protein Data Bank and integrate various resources.๐โโ๏ธ
Code and data for analyses presented in the paper "Assessment of AlphaFold2 for Human Proteins via Residue Solvent Exposure"
The program align output pdb file and extract pae plddt values to [.csv] for Alphafold 2.1.1
Extract the PAE & pLDDT value of Alphafold2 from .pkl to .png, .csv & .pdb file.
PROPKA predicts the pKa values of ionizable groups in proteins based in the 3D structure.
https://www.translation.manchester.ac.uk/training/