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simonvanvliet/MLS-Model

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Author: simonvanvliet

[email protected]

The following Code is supplied:

MODEL CODE

MLS_static_fast.py

Implementation of two species microbiome Multilevel selection model

MLS_evolveCoop_fast.py

Implementation of single species micobiome Multilevel selection model where investment is a continuous trait

mls_general_code.py

Defines several helper functions used in rest of code

Utility CODE

singleRunMLS.py

Code provides explanantion of model parameters, allows user to quickly set parameters, and run model

Figure CODE

MLS_figure_X.py

Run to recreate figures describes in Manuscript Each code tries to load existing data file from Data_Paper folder and uses this to make figures If data file cannot be found, or if parameters have changed, the model is rerun (warning: can take several hours to days for some of the figures!)

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MLS microbiome model

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