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Bayesian Multi-Trait Multi-Environment for genomic selection[R package] [Dev version]

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Bayesian Multi-Trait Multi-Environment | Development version 1.0.6

Maturing Travis build status Appveyor build status Coverage Status LGPL, Version 3.0 The project has reached a stable, usable state and is being actively developed. Dowloads from the CRAN CRAN

[Last README update: 2019-02-11]


Table of contents

News of this version (1.0.6)

  • [Fix bug] Fixed eigen values in BME and BMTME functions.

See the last updates in NEWS.

Instructions for proper implementation

Installation

To complete installation of dev version of BMTME from GitHub, you have to install Rtools Software and a few packages first.

install.packages('devtools')
devtools::install_github('frahik/BMTME')

Datasets

The package include 6 sample datasets

Name Lines Environment Traits Total of observations ME models MTME models
MaizeToy 30 3 3 270 * *
WheatIranian 30 2 2 120 * *
WheatJapa30 30 1 6 180 *
WheatJapa50 50 1 3 150 *
WheatMadaToy 50 1 6 300 *
WheatToy 30 3 2 180 * *

To load one dataset, use the function data(datasetName)

How to cite this package

First option, by the article paper

(Coming soon)

Second option, by the manual package

(Coming soon)

Contributions

If you have any suggestions or feedback, I would love to hear about it. Feel free to report new issues in this link, also if you want to request a feature/report a bug, or make a pull request if you can contribute.

Authors

  • Francisco Javier Luna-Vázquez (Author, Maintainer)
  • Osval Antonio Montesinos-López (Author)
  • Abelardo Montesinos-López (Author)
  • José Crossa (Author)
  • Fernando Tolero (Author)

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Bayesian Multi-Trait Multi-Environment for genomic selection[R package] [Dev version]

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