Thanks to visit codestin.com
Credit goes to github.com

Skip to content

Conversation

@talmo
Copy link
Collaborator

@talmo talmo commented Mar 1, 2023

Description

Basic threaded inference implementation. With this change, SLEAP object construction (and tracking) happen in a separate thread than neural network inference. This should unblock the GPU while we're building PredictedInstances.

Quick tests show that this super simple implementation increases overall inference speed by ~20% in cases where there are many instances/tracks.

It's not pretty, but I think we'll need to wait to de-duplicate the logic until we refactor the inference module into submodules or something.

Types of changes

  • Bugfix
  • New feature
  • Refactor / Code style update (no logical changes)
  • Build / CI changes
  • Documentation Update
  • Other (explain)

Does this address any currently open issues?

[list open issues here]

Outside contributors checklist

  • Review the guidelines for contributing to this repository
  • Read and sign the CLA and add yourself to the authors list
  • Make sure you are making a pull request against the develop branch (not main). Also you should start your branch off develop
  • Add tests that prove your fix is effective or that your feature works
  • Add necessary documentation (if appropriate)

Thank you for contributing to SLEAP!

❤️

@talmo talmo requested a review from roomrys March 1, 2023 05:18
@codecov
Copy link

codecov bot commented Mar 1, 2023

Codecov Report

Merging #1203 (522222a) into develop (788179d) will decrease coverage by 0.10%.
The diff coverage is 97.12%.

@@             Coverage Diff             @@
##           develop    #1203      +/-   ##
===========================================
- Coverage    72.00%   71.91%   -0.10%     
===========================================
  Files          132      132              
  Lines        23328    23403      +75     
===========================================
+ Hits         16798    16830      +32     
- Misses        6530     6573      +43     
Impacted Files Coverage Δ
sleap/nn/inference.py 81.54% <97.12%> (+0.94%) ⬆️
sleap/nn/evals.py 55.65% <0.00%> (-18.70%) ⬇️

📣 We’re building smart automated test selection to slash your CI/CD build times. Learn more

@roomrys roomrys merged commit e395952 into develop Mar 2, 2023
@roomrys roomrys deleted the talmo/threaded_inference branch April 4, 2023 01:37
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

2 participants