🧬 gget enables efficient querying of genomic reference databases

Access to Biological Web Services from Python.

Comprehensive Python client for the Uniprot REST API

UniProt Id Mapping through API

ProtVec can be used in protein interaction predictions, structure prediction, and protein data visualization.

PyMissense creates the pathogenicity plot and modified pdb as shown in the AlphaMissense paper for custom proteins.

naive index and query scripts for free reference bioinformatics datasets

A Python script to map PDB ID + chain ID to UniProt ID.

Utilities for downloading and managing protein FASTA files.

ProtGraph - A Graph-Generator for Proteins

Web scraper for UniProt and iPTMnet database

From taxonomic affiliations to annotated consensus proteomes using UniProt database.

Tool for converting between various gene ids

Functional sequence annotation, metamorphism and multifunctionality research over proteins

Store the bioinformatic information in a python object given a Uniprot ID

Pipeline plugins for PALADIN, providing HPC support, abundance (taxonomy, go terms), customized reports, etc

Tools to reliably map protein IDs to gene names.

Program and package that retrieves nucleotide coding sequences from NCBI that correspond to a set of input protein sequences.

Profile hidden Markov model (HMM) to identify the Kunitz domain in protein sequences, using MSA-guided training and optimization.

UniProt ↔ PDB residue mapper