anvio

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merenlab / anvio

An analysis and visualization platform for 'omics data

visualization javascript python science bioinformatics metagenomics comparative-genomics population-genetics phylogenomics metatranscriptomics pangenomics anvio

Updated Jan 18, 2026
Python

guyleonard / busco_hmms_for_anvio

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Making BUSCO HMMs useable in Anvi'o.

hmm hmmscan hmms busco anvio genome-completion

Updated Jul 27, 2018
Shell

PanAnalyzer is a powerful and integrated bioinformatics pipeline designed to streamline the process of genome analysis, moving from raw sequencing data to sophisticated, interactive pangenome visualization.

bioinformatics bioinformatics-pipeline genome-annotation genome-assembly pangenome anvio

Updated Dec 9, 2025
Python

juliantom / Pangenomes_of_the_Human_Oral_Microbiome

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Species-level pangenomes of the human oral microbiome constructed from eHOMD genomes using Anvi’o and reproducible Snakemake workflows.

snakemake-workflows genomics-visualization human-microbiome oral anvio pangenomes

Updated Jan 16, 2026
Python

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