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genetic-linkage

Here are 3 public repositories matching this topic...

zhangyi-he / WFM-2L-DiffusApprox-AdaptPMMH

Estimating temporally variable selection intensity from ancient DNA data with the flexibility of modelling linkage and epistasis

hmm population-genetics genotype-likelihoods adna natural-selection time-series-data diffusion-approximation genetic-linkage epistatic-interaction wright-fisher-model pmmh

Updated Apr 7, 2023
R

zhangyi-he / WFM-2L-DiffusApprox-PMMH

Detecting and quantifying natural selection at two linked loci from time series data of allele frequencies with forward-in-time simulations

hmm population-genetics adna natural-selection time-series-data diffusion-approximation genetic-linkage wright-fisher-model pmmh

Updated Oct 9, 2022
R

zhangyi-he / WFM-2L-Approx

Approximations for the Wright-Fisher model of population dynamics under natural selection at two linked loci

population-genetics natural-selection diffusion-approximation genetic-linkage wright-fisher-model gaussian-approximation hierarchical-beta-approximation

Updated Oct 10, 2022
R

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