Cython bindings and Python interface to HMMER3.
A package to annotate protein sequences
Annotate DNA sequences for Gene Ontology terms
A Pure-Python parser of HMMER3 output
Django website project for common sequence search tools.
A platform for targeted annotation of (meta)genomic and (meta)transcriptomic datasets using HMM sets.
Query sequence database by HMMs arranged in predefined synteny structure
An ML-based predictor of GPCR/G-protein couplings using only sequence information
A lightweight rewrite of run_dbcan for better multithread performance
basic visualization of hmm profile matches to multiple fasta files
Create HMMs from KEGG orthologs
MetAnnotate is a tool and web application for taxonomic profiling of shotgun metagenomes.
This repository contains the code used for screening putative extracellular Contractile Injection System (eCIS) loci from genomic sequences.
Command-line tools for genomics and proteomics analysis
Find NLR hmms in protein sequences.
HMMER-based microcin search using full microcin sequences and double-glycine signal region.
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