Tools for clustering and trajectory inference in large-scale genomic datasets (RNA-seq, ATAC-seq) using unsupervised deep learning. Implements a Variational Recurrent Neural Network (VRNN) for modeling single-cell time-series gene expression and chromatin accessibility.

This repository contains text files with information and links corresponding to QR codes featured in my poster. Each QR code directs viewers to detailed content, references, or supplementary materials related to the topics covered in the poster.

My science fair project to share

Analysis code, scripts, and data visualization from my Master's thesis focused on the multiomic integration (transcriptomics, lipidomics, spatial lipidomics) of monoglyceride responses in adipose tissue macrophages within the context of obesity.

MafB is a conserved transcriptional regulator of macrophage development and identity across tissues and species

Lab website