wgd v2: a suite of tools to uncover and date ancient polyploidy and whole-genome duplication
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Feb 12, 2025 - Python
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paleobiology
Here are 21 public repositories matching this topic...
The 2nd Annual American Museum of Natural History Hackathon produced by the BridgeUP: STEM program
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Feb 16, 2019 - Python
palaeoverse: an R package developed by palaeobiologists, for palaeobiologists
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Oct 3, 2025 - R
R client for the Pangaea database
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Sep 8, 2025 - R
R package for analysing diversity dynamics with fossil occurrences
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Jul 14, 2025 - HTML
paleobuddy: an R package for simulating diversification dynamics, fossil records and phylogenies in R.
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Oct 17, 2025 - R
Open Software for Teaching Evolutionary Biology at Multiple Scales Through Virtual Inquiries
phylogenetics population-genetics paleobiology comparative-methods evolutionary-biology macroevolution science-education biodiversity-science simulation-based-learning inquiry-based-learning data-driven-education
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Oct 21, 2025 - R
CRAN Task View: Paleontology
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Sep 24, 2025
Geometric Morphometric Tools for Paleobiology
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May 23, 2017 - R
A Julia interface to the Paleobiology Database (PBDB) data service.
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Sep 23, 2025 - Julia
A Python package for writing and formatting labels for geological, paleontological, and biological specimens and related items, such localities and expeditions.
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Oct 21, 2025 - Python
Interactive graphs associated with Fischer et al. 2020. Scientific Reports.
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Jan 7, 2021 - HTML
Reconstruction of Pleistocene climate based on assemblages of mammal microfossils from a cave in Hungary
oer paleobiology palaeobiology paleontology open-educational-resources fossils palaeontology palaeoclimate paleoclimate-reconstruction pleistocene microfossils
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Mar 23, 2024 - Jupyter Notebook
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Aug 11, 2022 - R
R package for Stratigraphic Paleobiology
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Oct 16, 2025 - R
Semantically remaps the API response from the Paleobiology Database for all taxonomies under Superorder Dinosauria
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Nov 22, 2015
Shiny app visualizing the effects of sedimentary condensation
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Mar 3, 2025 - R
Streamlit application and standalone Python script for retrieving original publication data for fauna using the Paleobiology Database.
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Oct 21, 2025 - Python
shelltrace
shell chemistry growth fisheries elements paleobiology palaeobiology palaeoecology paleoclimate bivalve mollusk
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Nov 2, 2017 - R
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