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Merged
mfshao merged 4 commits into from
Nov 8, 2023
Merged

Chore/gh action #247

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7bc2a00
move to gh action
mfshao Nov 7, 2023
9e8af2e
fix
mfshao Nov 7, 2023
dd94f65
fix for npm
mfshao Nov 7, 2023
74bf270
fix
mfshao Nov 7, 2023
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37 changes: 37 additions & 0 deletions .github/workflows/ci.yaml
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Original file line number Diff line number Diff line change
@@ -0,0 +1,37 @@
name: CI

on:
push:
pull_request:
types: [opened, reopened]

concurrency:
group: '${{ github.workflow }} @ ${{ github.event.pull_request.head.label || github.head_ref || github.ref }}'
cancel-in-progress: true


jobs:
Security:
name: Security Pipeline
uses: uc-cdis/.github/.github/workflows/securitypipeline.yaml@master
with:
python-poetry: 'false'
secrets: inherit

ci:
name: Build Image and Push
uses: uc-cdis/.github/.github/workflows/image_build_push.yaml@master
secrets:
ECR_AWS_ACCESS_KEY_ID: ${{ secrets.ECR_AWS_ACCESS_KEY_ID }}
ECR_AWS_SECRET_ACCESS_KEY: ${{ secrets.ECR_AWS_SECRET_ACCESS_KEY }}
QUAY_USERNAME: ${{ secrets.QUAY_USERNAME }}
QUAY_ROBOT_TOKEN: ${{ secrets.QUAY_ROBOT_TOKEN }}

unit_test:
name: NPM Unit Test
uses: uc-cdis/.github/.github/workflows/npm_unit_test.yaml@master
with:
node-version: '16'
npm-version: '8'
pre-test: 'COMMIT=`git rev-parse HEAD` && echo "export const gitCommit = \"${COMMIT}\";" >server/version.js && VERSION=`git describe --always --tags` && echo "export const gitVersion =\"${VERSION}\";" >>server/version.js'
post-test: 'npm run eslint'
13 changes: 0 additions & 13 deletions .github/workflows/image_build_push.yaml
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20 changes: 0 additions & 20 deletions .travis.yml
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2 changes: 1 addition & 1 deletion Dockerfile
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Expand Up @@ -14,7 +14,7 @@ RUN apt-get update \
&& curl -sL https://deb.nodesource.com/setup_16.x | bash - \
&& apt-get install -y --no-install-recommends nodejs \
&& rm -rf /var/lib/apt/lists/* \
&& npm install -g npm@8.5
&& npm install -g npm@8

COPY . /guppy/
WORKDIR /guppy
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