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CLI tool for running JAX training on Google Cloud Spot TPUs with automatic preemption recovery and checkpoint resumption

Python 5 Updated Feb 25, 2026

Declarative visualization library for Python

Python 10,271 837 Updated Feb 25, 2026

A conda-smithy repository for r-immunarch.

Shell 1 2 Updated Sep 25, 2025

Single-cell spatial omics analysis that makes you happy!

Python 52 6 Updated Feb 25, 2026

MkDocs i18n plugin using static translation markdown files

Python 315 48 Updated Feb 23, 2026

Xenium spatial transcriptomics analysis pipeline built with Nextflow

Python 5 Updated Feb 23, 2026

Tips for bioinformaticians and computational biologists

Shell 3 1 Updated Feb 25, 2026

This tutorial runs through the basics of ggplot2 and how to make a figure ready for publication.

HTML 57 4 Updated Jul 5, 2020

LLM application tracing based on OpenTelemetry

Python 16 4 Updated Nov 24, 2025

🦋 immundata [R package] – A Unified Data Layer for Large-Scale Single-Cell, Spatial and Bulk Immunomics

R 2 Updated Dec 16, 2025

Convert TCR gene names

Python 15 Updated Dec 26, 2025

Polars plugin for pairwise distance functions

Rust 97 11 Updated Apr 20, 2025

T/B cell receptor sequencing analysis notes

276 40 Updated Dec 1, 2024

A drop-in replacement for dplyr, powered by DuckDB for speed.

R 373 26 Updated Feb 26, 2026

Pipeline framework for iteratively and reproducibly building and evaluating single cell atlases

Python 48 7 Updated Feb 20, 2026

tutorials to run panpipes

5 3 Updated Mar 18, 2025
Python 25 2 Updated Dec 5, 2025

A fast, clean, responsive Hugo theme.

HTML 400 103 Updated Mar 20, 2025

Lightweight library for scraping web-sites with LLMs

Python 1,269 73 Updated Dec 17, 2025

the portable Python dataframe library

Python 6,412 703 Updated Feb 26, 2026

Asynchronous Python PostgreSQL driver written in Rust

Rust 343 14 Updated Feb 23, 2026

DelightfulTTS + UnivNet or HifiGAN

Jupyter Notebook 4 Updated Jun 12, 2024

Multi-modal single cell analysis pipelines

Python 62 12 Updated Dec 11, 2025

Rapid fuzzy string matching in Rust using various string metrics

Rust 66 5 Updated Jun 29, 2024

permanova just got oxidized!

Python 10 Updated Apr 27, 2024

BOT - A Bot for Technical documentation

Python 1 2 Updated Jun 28, 2023

The Virtual Feature Store. Turn your existing data infrastructure into a feature store.

Go 1,966 102 Updated Jul 3, 2025

update your R version in a breeze ( on OSX) √

R 143 23 Updated May 27, 2021

An elegant Go board and SGF editor for a more civilized age.

JavaScript 2,650 402 Updated Feb 25, 2026

eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee…

Python 2 1 Updated Jun 15, 2019
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