Changes in this Release:

• Fixed bug missing the last line of AGP input

Changes in this Release:

• Added basic CIGAR support for GFA>FASTA conversion (assembly graphs
• Improved documentation
• Fixed bug in --exclude-bed directive
• Added SAK header renaming instructions

Changes in this Release

DO NOT USE: a bug was introduced in this version that makes many features unstable. Fixed in v1.3.9.

Changes in this Release:

• few bug fixes
• added source code for submodules to the release

Changes in this Release

Changes in this Release:

• integrated semaphore gzip decompressor
• added --discover-terminal-overlaps to identify residual overlaps in the assembly graph
• added circular sequence counter from edges

• bug fix for AGP overlay on GFA

Changes in this Release:

• recursive submodules in github workflows

Changes in this Release:
-fixed minor bug when reading gfa with edges in paths

Changes in this Release:

• extensive refactoring to use gfalibs (now need --recursive when git clone)
• fixed bug with compressed GFA1 input
• fixed bug with GFA>FASTA conversion