Thanks to visit codestin.com
Credit goes to github.com

Skip to content

vitor-mendes-iq/iSTATS

Repository files navigation

iSTATS

Intro

A package developed in R using shiny dashbord, iSTATS (interactive STAtisTical Spectroscopy) have a GUI platform to when user can analize NMR data. From the construction of the matrix, going through a pre-treatment of the data to the application of STOCSY methods, which are used in the study of metabolomics, and among other areas whose characterization and relationship between the molecules are the object of study in NMR technology.

Install iSTATS

There are 2 ways to install iSTATS, fisrt one is on CRAN (The Comprehensive R Archive Network) and another is from here github.

Install iSTATS from CRAN

You can install by R with command install.packages('iSTATS') or you can use RStudio tool as in the figure below:

Alt ou título da imagem

Install iSTATS from Github

First install devtools package with the command install.packages("devtools"). After install library(devtools), you can install iSTATS with the command install_github("vitor-mendes-iq/iSTATS").

Run iSTATS

After install iSTATS, you must load and run the package with the commands library(iSTATS) and iSTATS(), so it will open in the web browser.

How to use iSTATS step by step

iSTATS open on browser in the menu Home where have gif that ilustrate the step to how using iSTATS. On the top it have five menus: Data, Plot, Select, STOCSY and Home.

first Step: import data

The first menu that we should use is DATA, where are four sections, one data example and three of then for each kind of file extension: .csv, .ascii (Bruker-Topspin export) and .Rdata.

Import CSV file

In this section we need first define the range of spectra that we need to analize (default is 0 - 10 ppm) them on the botton of Choose CSV Files we can click in browse and choose the CSV file that need to have ppm separete by virgula to intenssity signal, like show in figure 2

Alt ou título da imagem

About

A package to analize nmr data.

Resources

License

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published

Contributors 3

  •  
  •  
  •  

Languages